Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938735.1_cds_XP_016483517.1_74619
CDS Infomation

[gene=LOC107804188] [db_xref=GeneID:107804188] [protein=poly(A)-specific ribonuclease PARN-like] [protein_id=XP_016483517.1] [location=join(8244..8632,10096..10226,11257..11585,11875..11988,12404..12530,12613..12883,13252..14056)] [gbkey=CDS]
Sequence

ATGAAGAAACATTGTATGTTGAAACCTCTATCAACAACCCTAATCCAAATATCCCACGCT
CCGATCACCTCTTTCACTACGCGCCGCCGCGCCCTCTCTTCCTCTTCCTCTTCCTCTTCC
TCTTCCTTCGCGCTCAAGAATGTTACCAAATCGAACTTCGAATCAGCTCTCAATGACCTA
CGAGGTCTTGTACGCGACGCCGATTTCGTCGCCGTCGATTTGGAAATGACCGGAGTAACC
AGCGCTCCTTGGAGAGATTCCTTCGACTTCGACCGATATGATATTCGTTACCTCAAAGTT
AAGGACTCCGCCGAGAAGTTCGCCGTCGTTCAGTTCGGCGTTTGTCCTTTCCGTTGGGAC
TCTCACAAGCAATCCTTTCTCGCGCATCCACATAACTTTTATATATTCCCACGGCAAGAA
ATCCCTGGTAGCAACCAATCCTATGAGTTCCTTTGCCAGACAGCCTCACTTGATTTCCTG
GCAAAATACCAGTTTGATTTCAATGTGTGCATACGTGAAGGAGTCTCTTATTTATCCAGA
AGCCAAGAAGAGGAAGCACTGGAACGTATAAGTTCAACATTCATGGATGAATCATCGGAT
TCCGTGTATGGCTTGAGAGAAGATGCAGAGTTTCCATTGATTAGGATGGCAGATGTTCTA
TTTGCTGAAAGAATGAAGAACACAATAAGGGAATGGCATGCTAGTTTGTTAAGTAAGGGA
AGCAGTAGCTCTGAAATTAAACAAATGTCAACTGATCCAAACCAGAGATTTCAAATGGTT
TTCTTCAAGACCCGTCCAGCCCTTGCCCTTAGTGGGTTTACTTCTCGCCAGCTAAGGGTG
ATTAAATCGGTCACTAAAAAGCATTTCAAAGATCTATCCTATATCAGAGTAGCTGGCGAA
GCAACATCTCCGCAGCAATTGATTGTCTATACAGATTCCAATGATGACAAGGATCTACTG
ATGAAAGAGGTGAAGGAAGGCCTTCGTAAAGAAGCAGAAATAAAGGTCAAATCTGCTGTT
GGATTTCGACATGTTATTGATCTTCTTTCCTCGGAGCGGAAGTTGATTGTCGGACACAAT
TGCTTTCTTGATATGGCGCATATATACAGTAAATTCATTGGTCCACTACCTTTGACCGTG
GAGGACTATGTGTCTTCCATTCAGAAGTACTTTCCTTGCATAATTGACACCAAAATACTC
TTGAATGCAAACGGTGTTTTTCAACAGAGAGTGAATAAAAGCAGCACATCACTATCCAGA
GCGTTTGTCTCTATCTGTCCTCAAATTGCATTAGGTGTCAAAACTTCTGGTTTGGCTGAT
AGACCGTGTGTAGAAGTGGAGGTTCAAGTTGATGAAAACAGATTCTTGAACTGGAACTCA
GGGGCCAAGCATGAAGCTGGCTATGATGCATTTATGACTGGATGCATTTTTGCACAGGCG
TGCAATCATCTAGGCATTGATTTCACCCTCCATGTGCTTGCTGGAGGTTTACCCAAGCAG
ACAAAGCTTCAGAATTATATCAATCGCCTTTACCTTAGCTGGGTTAGTGGAGACATCATT
GATCTAAGTACTGGGAAATGTACAACAGACACCTCAGCTTCTAGTAACCTCAAAAGTCGG
TACCAGGAGATTTCATTTCCTAGCATCGTTTTGTTGTGGGGATTACCATCTAAACTAAAA
GCAAGGGAGATCAAAGCTTGTATAGTAAAAGTCTTTGGCCCAAATTCTATTTCCTCTATC
TACCATTTGGATGAAAGCGCCGTCTTTATTCAGTTTAGCAAGCCAGAAATGGTTTCTAAG
TTTCTGGAAATAAAGGAAACTCTAAGTAAGAACAGCGATCCAATTTCAGTGTTGCATCCT
CTTTCGGATATTCTGAACGCCGACTGCACTCACGCAGCTAACTATGATGTGTATCAACAA
ATATGCAGTTCACCCATCTCAAAGAAATTATTTGCAGATCAGGCTGAAGCTGTTGGTATC
AAACACAAAACAGCATCATCCAGGGCAGAAGGGAAAAAAAAGGGAAACCAGGTATTTGGC
AAAGAAAACGAAGTTAGGGTGTTTGATAAGAAAGTAGATGATATGATGAGTTCATCGTAT
GGTTATTCTGAAACGGATAGATCTGCCGATTCTTTTCATCTAGATGAAGCTCTGGCAAGC
AAATAG

Peptide Sequence

PEP ID

XP_016483517.1
PEP Infomation

PREDICTED: poly(A)-specific ribonuclease PARN-like [Nicotiana tabacum]
Sequence

MKKHCMLKPLSTTLIQISHAPITSFTTRRRALSSSSSSSSSSFALKNVTKSNFESALNDL
RGLVRDADFVAVDLEMTGVTSAPWRDSFDFDRYDIRYLKVKDSAEKFAVVQFGVCPFRWD
SHKQSFLAHPHNFYIFPRQEIPGSNQSYEFLCQTASLDFLAKYQFDFNVCIREGVSYLSR
SQEEEALERISSTFMDESSDSVYGLREDAEFPLIRMADVLFAERMKNTIREWHASLLSKG
SSSSEIKQMSTDPNQRFQMVFFKTRPALALSGFTSRQLRVIKSVTKKHFKDLSYIRVAGE
ATSPQQLIVYTDSNDDKDLLMKEVKEGLRKEAEIKVKSAVGFRHVIDLLSSERKLIVGHN
CFLDMAHIYSKFIGPLPLTVEDYVSSIQKYFPCIIDTKILLNANGVFQQRVNKSSTSLSR
AFVSICPQIALGVKTSGLADRPCVEVEVQVDENRFLNWNSGAKHEAGYDAFMTGCIFAQA
CNHLGIDFTLHVLAGGLPKQTKLQNYINRLYLSWVSGDIIDLSTGKCTTDTSASSNLKSR
YQEISFPSIVLLWGLPSKLKAREIKACIVKVFGPNSISSIYHLDESAVFIQFSKPEMVSK
FLEIKETLSKNSDPISVLHPLSDILNADCTHAANYDVYQQICSSPISKKLFADQAEAVGI
KHKTASSRAEGKKKGNQVFGKENEVRVFDKKVDDMMSSSYGYSETDRSADSFHLDEALAS
K

Transcript Sequence

Gene sequence data has not been registered.